tool_shed Package¶

`tool_shed` Package¶

The Galaxy Tool Shed application.

`app` Module¶

class galaxy.webapps.tool_shed.app.UniverseApplication(**kwd)[source]¶

Bases: object

Encapsulates the state of a Universe application

shutdown()[source]¶

`buildapp` Module¶

Provides factory methods to assemble the Galaxy web application

class galaxy.webapps.tool_shed.buildapp.CommunityWebApplication(galaxy_app, session_cookie='galaxysession', name=None)[source]¶: Bases: galaxy.web.framework.webapp.WebApplication

galaxy.webapps.tool_shed.buildapp.add_ui_controllers(webapp, app)[source]¶: Search for controllers in the ‘galaxy.webapps.controllers’ module and add them to the webapp.

galaxy.webapps.tool_shed.buildapp.app_factory(global_conf, **kwargs)[source]¶: Return a wsgi application serving the root object

galaxy.webapps.tool_shed.buildapp.build_template_error_formatters()[source]¶: Build a list of template error formatters for WebError. When an error occurs, WebError pass the exception to each function in this list until one returns a value, which will be displayed on the error page.

galaxy.webapps.tool_shed.buildapp.wrap_in_middleware(app, global_conf, **local_conf)[source]¶: Based on the configuration wrap app in a set of common and useful middleware.

galaxy.webapps.tool_shed.buildapp.wrap_in_static(app, global_conf, **local_conf)[source]¶

`config` Module¶

Universe configuration builder.

class galaxy.webapps.tool_shed.config.Configuration(**kwargs)[source]¶

Bases: object

check()[source]¶

get(key, default)[source]¶

get_bool(key, default)[source]¶

is_admin_user(user)[source]¶: Determine if the provided user is listed in admin_users.

sentry_dsn_public¶: Sentry URL with private key removed for use in client side scripts, sentry server will need to be configured to accept events

shed_tool_data_path¶

exception galaxy.webapps.tool_shed.config.ConfigurationError[source]¶: Bases: exceptions.Exception

galaxy.webapps.tool_shed.config.configure_logging(config)[source]¶: Allow some basic logging configuration to be read from the cherrpy config.

galaxy.webapps.tool_shed.config.get_database_engine_options(kwargs)[source]¶: Allow options for the SQLAlchemy database engine to be passed by using the prefix “database_engine_option”.

galaxy.webapps.tool_shed.config.resolve_path(path, root)[source]¶: If ‘path’ is relative make absolute by prepending ‘root’